SNP Profiles of GU 154 /C   View Data

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 Key

 1234567891011121314
_Input profile
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
1._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
2._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
3._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
4._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
5._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
6._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
7._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
8._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
9._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
10._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
11._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
12._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
13._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
14._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
15._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
16._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
17._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
18._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
19._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
20._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
21._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
22._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
23._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
24._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGG_AGCC
25._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGG_AGCC
26._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
27._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
28._GC-01-78-4-14
GGGGCGGGAAAAAA__AAGGGGAGGG
 1516171819202122232425262728
_Input profile
AAGGCCCCGGGGCCACCCGGCCAAGGGG
1._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
2._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
3._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
4._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
5._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
6._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
7._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
8._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
9._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
10._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
11._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
12._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
13._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
14._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
15._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
16._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
17._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
18._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
19._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
20._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
21._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
22._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
23._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
24._GC-01-078-4-14
AAGGCCCCGGGGCCACCCGGCCAAGGGG
25._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
26._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
27._GU_154_/C
AAGGCCCCGGGGCCACCCGGCCAAGGGG
28._GC-01-78-4-14
AAGGGGGGCCCCGGACCCCC_AA_GG
 29303132333435363738    
_Input profile
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
1._GC-01-078-4-14
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
2._GC-01-078-4-14
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
3._GC-01-078-4-14
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
4._GC-01-078-4-14
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
5._GC-01-078-4-14
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
6._GC-01-078-4-14
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
7._GC-01-078-4-14
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
8._GC-01-078-4-14
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
9._GC-01-078-4-14
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
10._GC-01-078-4-14
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
11._GC-01-078-4-14
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
12._GU_154_/C
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
13._GU_154_/C
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
14._GU_154_/C
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
15._GU_154_/C
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
16._GU_154_/C
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
17._GU_154_/C
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
18._GU_154_/C
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
19._GU_154_/C
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
20._GU_154_/C
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
21._GU_154_/C
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
22._GC-01-078-4-14
_CCGGCCAATTTTAAATGGX_XX_XX_XX_X
23._GC-01-078-4-14
AACCGGCC_TTTTAAATGGX_XX_XX_XX_X
24._GC-01-078-4-14
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
25._GU_154_/C
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
26._GU_154_/C
AACCGGCC_TTTTAAATGGX_XX_XX_XX_X
27._GU_154_/C
_CCGGCCAATTTTAAATGGX_XX_XX_XX_X
28._GC-01-78-4-14
AAGGGGGGAAAAAAAAATGGX_XX_XX_XX_X

Input profile: GU_154_/C

 
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Mars Center for Cocoa Science, Brazil
Location: 1414 5
 Dapeng Zhang, 2016

1._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

2._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018

3._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

4._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

5._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

6._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

7._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

8._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

10._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

11._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

12._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 15 > F
 Dapeng Zhang, 2016

13._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 2
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

14._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 3
 Dapeng Zhang, 2016

15._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 4
 Dapeng Zhang, 2016

16._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 9
 Dapeng Zhang, 2016

17._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 13
 Dapeng Zhang, 2016

18._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 14
 Dapeng Zhang, 2016

19._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 16
 Dapeng Zhang, 2016

20._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 10 > F
 Dapeng Zhang, 2016

21._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 12 > F
 Dapeng Zhang, 2016

22._GU_154_/C GC-01-078-4-14

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

23._GU_154_/C GC-01-078-4-14

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

24._GU_154_/C GC-01-078-4-14

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

25._GU_154_/C

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 7
 Dapeng Zhang, 2016

26._GU_154_/C

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 8
 Dapeng Zhang, 2016

27._GU_154_/C

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 1 > FP
 Dapeng Zhang, 2016

28._GU_154_/C GC-01-78-4-14

50 %
34 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP619 22TcSNP591 23TcSNP577 24TcSNP560 25TcSNP534
26TcSNP529 27TcSNP469 28TcSNP429 29TcSNP372 30TcSNP242
31TcSNP230 32TcSNP226 33TcSNP193 34TcSNP151 35TcSNP150
36TcSNP144 37TcSNP32 38TcSNP25